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Series GSE30029 Query DataSets for GSE30029
Status Public on Jul 19, 2011
Title Gene expression profiling in the leukemic stem cell-enriched CD34+ fraction identifies target genes that predict prognosis in normal karyotype AML
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Mononuclear cells from AML patients (n=46) were sorted into CD34+ and CD34- subfractions and genome-wide expression analysis was performed using Illumina BeadChip Arrays (HT12 v3). Of 2 AML samples only the CD34+ fraction could be analyzed. AML CD34+ and CD34- gene expression was compared to a large group of normal CD34+ bone marrow cells (n=31).
 
Overall design Mononuclear cells from AML patients (n=46) were sorted into CD34+ (46) and CD34- (44) subfractions and genome-wide expression analysis was performed using Illumina BeadChip Arrays (HT12 v3). AML CD34+ and CD34- gene expression was compared to a large group of normal CD34+ bone marrow cells (n=31).
 
Contributor(s) de Jonge HJ, Woolthuis CM, Vos AZ, Mulder A, van den Berg E, Kluin PM, van der Weide K, de Bont ES, Huls G, Vellenga E, Schuringa JJ
Citation(s) 21760593, 25287709
Submission date Jun 16, 2011
Last update date Aug 16, 2018
Contact name JJ Schuringa
E-mail(s) j.j.schuringa@umcg.nl
Organization name UMCG
Department Experimental Hematology
Street address Hanzeplein 1
City Groningen
ZIP/Postal code 9700RB
Country Netherlands
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (121)
GSM743072 AML 2005 051 CD34-
GSM743073 AML 2005 258 CD34+
GSM743074 normal 2008 250 CD34+
Relations
BioProject PRJNA144051

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30029_RAW.tar 6.2 Mb (http)(custom) TAR
GSE30029_non-normalized.txt.gz 22.1 Mb (ftp)(http) TXT
GSE30029_normalized.txt.gz 21.8 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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