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| Status |
Public on Mar 01, 2012 |
| Title |
Genome-wide expression profiling reveals transcriptional reprogramming in Fusarium graminearum by FgV1-DK21 virus infection |
| Organism |
Fusarium graminearum |
| Experiment type |
Expression profiling by array
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| Summary |
Using a 3′-tiling microarray covering the whole F. graminearum genes, we carried out genome-wide expression analyses of F. graminearum infected with FgV-DK21 (Mycovirus) at two different time stages (36 h and 120 h).
Our study is the first report which elucidated the global alternation of the prominent cellular pathways in fungal host by FgV1-DK21 virus infection.
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| Overall design |
A total of 12 chips were used for microarray. At 36 h and 120 h, total RNAs were extracted from virus free Fusarium and virus infected Fusarium with three biological replicates.
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| Contributor(s) |
Cho W, Yu J, Lee K, Son M, Kim K |
| Citation(s) |
22559730 |
| |
| Submission date |
Jul 11, 2011 |
| Last update date |
Jun 18, 2012 |
| Contact name |
Won Kyong Cho |
| E-mail(s) |
wonkyong@gmail.com
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| Phone |
+82-2-880-4928
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| Organization name |
Seoul National University
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| Department |
Department of Agricultural Biotechnology and Center for Fungal Pathogenesis
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| Street address |
5103-ho, 200-dong, Daehak-dong, Kwanak-gu
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| City |
Seoul |
| ZIP/Postal code |
151-921 |
| Country |
South Korea |
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| Platforms (1) |
| GPL13843 |
Roche Nimblegen G.zeae 135K microarray |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA144485 |
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