 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jun 05, 2013 |
| Title |
Expression data from dormant and after-ripened wheat seeds and after-ripened seeds imbibed in ABA. |
| Organism |
Triticum aestivum |
| Experiment type |
Expression profiling by array
|
| Summary |
Wheat seed dormancy is released by after-ripening, and germination and seminal root growth of after-ripened/non-dormant seeds can be inhibited by treatment with exogenous ABA.
We used Affymetrix GeneChip Wheat Genome Array to detail transcriptional programs affected by after-ripening of dormant seeds and imbibition of after-ripened seeds in ABA.
|
| |
|
| Overall design |
Dry and imbibed (in water for 12 h and 24 h) dormant and after-ripened seeds, and after-ripened seeds imbibed in ABA for 24 h were used for RNA extraction and hybridization on Affymetrix GeneChip. After-ripened seeds were generated by storing dormant seeds at room temperature for 10 months.
|
| |
|
| Contributor(s) |
Ayele BT, Jordan MC, Gao F |
| Citation(s) |
23437172, 29211628 |
| |
| Submission date |
Sep 27, 2011 |
| Last update date |
Oct 08, 2023 |
| Contact name |
Belay T. Ayele |
| Organization name |
University of Manitoba
|
| Department |
Plant Science
|
| Lab |
Crop Technology Center
|
| Street address |
222 Agriculture Building
|
| City |
Winnipeg |
| State/province |
MB |
| ZIP/Postal code |
R3T 2N2 |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL3802 |
[wheat] Affymetrix Wheat Genome Array |
|
| Samples (21)
|
| GSM802208 |
24 imbibed dormant, biological rep1 |
| GSM802209 |
24 imbibed dormant, biological rep2 |
| GSM802210 |
24 imbibed dormant, biological rep3 |
| GSM802211 |
dry after-ripened, biological rep1 |
| GSM802212 |
dry after-ripened, biological rep2 |
| GSM802213 |
dry after-ripened, biological rep3 |
| GSM802214 |
24 imbibed after-ripened, biological rep1 |
| GSM802215 |
24 imbibed after-ripened, biological rep2 |
| GSM802216 |
24 imbibed after-ripened, biological rep3 |
| GSM869745 |
12 h imbibed dormant, biological rep1 |
| GSM869747 |
12 h imbibed dormant, biological rep2 |
| GSM869748 |
12 h imbibed dormant, biological rep3 |
| GSM869750 |
12 imbibed after-ripened, biological rep1 |
| GSM869752 |
12 imbibed after-ripened, biological rep2 |
| GSM869753 |
12 imbibed after-ripened, biological rep3 |
| GSM1015973 |
24 h ABA imbibed after-ripened, biological rep1 |
| GSM1015974 |
24 h ABA imbibed after-ripened, biological rep2 |
| GSM1015975 |
24 h ABA imbibed after-ripened, biological rep3 |
|
| Relations |
| BioProject |
PRJNA146387 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE32409_RAW.tar |
103.2 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
|
|
|
|
 |
Less...
More...