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Series GSE32627 Query DataSets for GSE32627
Status Public on Oct 06, 2011
Title Genome-wide mapping of Sox6 binding sites in mouse fetal myotubes
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary In order to understand how Sox6 coordinately regulates the transcription of multiple fiber type specific genes during muscle development, we have performed ChIP-seq analyses to identify Sox6 target genes as well as RNA polymerase II (Pol II) binding sites in mouse fetal myotubes.
Overall design Examination of Sox6 and Pol II binding sites in mouse fetal primary myotubes
Contributor(s) An C, Hagiwara N
Citation(s) 21985497
Submission date Oct 05, 2011
Last update date May 15, 2019
Contact name Chung-Il An
Organization name University of California, Davis
Street address One Shields Ave.
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
Platforms (1)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
Samples (6)
GSM808746 Sox6_ChIPSeq_rep1
GSM808747 Sox6_ChIPSeq_rep2
GSM808748 PolII_ChIPSeq_rep1
SRA SRP008680
BioProject PRJNA147805

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32627_RAW.tar 808.3 Mb (http)(custom) TAR (of BED, GFF)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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