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Series GSE33926

Query DataSets for GSE33926

Status

Public on Nov 01, 2012

Title

Molecular characteristics and metastasis predictor genes of triple-negative breast cancer

Organism

Experiment type

Expression profiling by array
Third-party reanalysis

Summary

This microarray dataset contains 51 triple-negative breast cancers with clinical and recurrence information for at least 3 years of follow-up and 106 luminal breast cancers (reanalyzed data from Series GSE24124, GSE9309, and GSE17040).
A novel set of 45-gene signature that was statistically predictive of distant metastasis recurrence for triple-negative breast cancer was identified in this study.

Overall design

Specimens of breast cancer tissue were collected and snap-frozen from breast cancer patients who had surgery between 1995 and 2008 at National Taiwan University Hospital (NTUH, Taipei, Taiwan). Clinicopathological information was obtained for all breast cancer patients along with informed consent. The AJCC/UICC TNM system was used for breast cancer staging classification.

Contributor(s)

Citation(s)

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0045831

Submission date

Nov 23, 2011

Last update date

Jan 04, 2013

Contact name

King-Jen Chang

Organization name

National Taiwan University Hospital

Department

Department of Surgery

Street address

No.1, Changde St., Zhongzheng Dist.

City

Taipei

ZIP/Postal code

100

Country

Taiwan

Platforms (1)

Agilent-012097 Human 1A Microarray (V2) G4110B (Probe Name version)

Samples (51)

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GSM838826	breast tumor part_IDC_rep1_1453
GSM838827	breast tumor part_IDC_rep1_1621
GSM838828	breast tumor part_IDC_rep1_1657

GSM838829	breast tumor part_IDC_rep1_1661
GSM838830	breast tumor part_IDC_rep1_1683
GSM838831	breast tumor part_IDC_rep1_2461
GSM838832	breast tumor part_IDC_rep1_4353
GSM838833	breast tumor part_IDC_rep1_4355
GSM838834	breast tumor part_IDC_rep1_4359
GSM838835	breast tumor part_IDC_rep1_4361
GSM838836	breast tumor part_IDC_rep1_4363
GSM838837	breast tumor part_IDC_rep1_4365
GSM838838	breast tumor part_IDC_rep1_4367
GSM838839	breast tumor part_IDC_rep1_4369
GSM838840	breast tumor part_IDC_rep1_4371
GSM838841	breast tumor part_IDC_rep1_4373
GSM838842	breast tumor part_IDC_rep1_4375
GSM838843	breast tumor part_IDC_rep1_4377
GSM838844	breast tumor part_IDC_rep1_4379
GSM838845	breast tumor part_IDC_rep1_4381
GSM838846	breast tumor part_IDC_rep1_4383
GSM838847	breast tumor part_IDC_rep1_4385
GSM838848	breast tumor part_IDC_rep1_4387
GSM838849	breast tumor part_IDC_rep1_4389
GSM838850	breast tumor part_IDC_rep1_4391
GSM838851	breast tumor part_IDC_rep1_4393
GSM838852	breast tumor part_IDC_rep1_4395
GSM838853	breast tumor part_IDC_rep1_4397
GSM838854	breast tumor part_IDC_rep1_4399
GSM838855	breast tumor part_IDC_rep1_4401
GSM838856	breast tumor part_IDC_rep1_4403
GSM838857	breast tumor part_IDC_rep1_4405
GSM838858	breast tumor part_IDC_rep1_4407
GSM838859	breast tumor part_IDC_rep1_4409
GSM838860	breast tumor part_IDC_rep1_4411
GSM838861	breast tumor part_IDC_rep1_4413
GSM838862	breast tumor part_IDC_rep1_5307
GSM838863	breast tumor part_IDC_rep1_5317
GSM838864	breast tumor part_IDC_rep1_5323
GSM838865	breast tumor part_IDC_rep1_5325
GSM838866	breast tumor part_IDC_rep1_5327
GSM838867	breast tumor part_IDC_rep1_5329
GSM838868	breast tumor part_IDC_rep1_5345
GSM838869	breast tumor part_IDC_rep1_5347
GSM838870	breast tumor part_IDC_rep1_5357
GSM838871	breast tumor part_IDC_rep1_5393
GSM838872	breast tumor part_IDC_rep1_5399
GSM838873	breast tumor part_IDC_rep1_8571
GSM838874	breast tumor part_IDC_rep1_8573
GSM838875	breast tumor part_IDC_rep1_8575
GSM838876	breast tumor part_IDC_rep1_8577

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BioProject

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE33926_RAW.tar	254.0 Mb	(http)(custom)	TAR (of TXT)
GSE33926_complete_dataset.txt.gz	11.7 Mb	(ftp)(http)	TXT
Processed data included within Sample table
Processed data are available on Series record

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