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Series GSE35359 Query DataSets for GSE35359
Status Public on Jan 27, 2012
Title 5-aza-2'-cytidine and trichostatin A effect to gene expression of Epstein-Barr virus-transformed human lymphoblastoid cell lines (LCLs).
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Investigation of 5-aza-2'-cytidine and trichostatin A effect to gene expression of human LCLs. LCLs estabulished from patients with genetic dissease are commonly used for mRNA or protein analysis of disease related genes. However, ofen times the gene of interset is not expressed in LCL. Epigenetic modification could be overcome this problem.
Overall design Expression array study with total RNA extracted from normal male derived LCLs with eight 60-mer probe per gene. 47633 exemplar genes representing a total of 63780 transcripts variants.
Contributor(s) Niida Y
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Submission date Jan 26, 2012
Last update date Mar 23, 2012
Contact name Yo Niida
Organization name Kanazawa Univ.
Street address 13-1 Takaramachi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
Platforms (1)
GPL15143 NimbleGen Human Expression Array [2006-08-03_HG18_60mer_expr]
Samples (4)
GSM866772 control
GSM866773 cultured with 5-aza-2'-cytidine
GSM866774 cultured with trichostatin A
BioProject PRJNA152745

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35359_5AzaC-TSA_pvalues_matrix.txt.gz 3.2 Mb (ftp)(http) TXT
GSE35359_5AzaC_pvalues_matrix.txt.gz 3.2 Mb (ftp)(http) TXT
GSE35359_RAW.tar 49.3 Mb (http)(custom) TAR (of PAIR)
GSE35359_TSA_pvalues_matrix.txt.gz 3.2 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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