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Series GSE35439 Query DataSets for GSE35439
Status Public on Feb 01, 2012
Title Differences in gene expression of Mustard and Kenny mutants relative to control w1118 flies 24 hours after access to food contaminated with Vibrio cholerae
Organism Drosophila melanogaster
Experiment type Expression profiling by array
Summary Mustard and Kenny mutants are resistant to oral infection with V.cholerae. We used microarrays to determine whether Key and Mtd have overlapping regulons.
Overall design Key1 and Mtd mutant and CTL flies were given access to Vibrio cholerae in LB. After 24 hours, whole flies were homogenized and RNA was isolated.
Contributor(s) Berkey C, Watnick P
Citation(s) 22427641
Submission date Jan 31, 2012
Last update date Aug 28, 2018
Contact name Paula Watnick
Phone 617-919-2918
Organization name Children's Hospital, Boston
Department Infectious Diseases
Street address 300 Longwood Avenue
City Boston
ZIP/Postal code 02115
Country USA
Platforms (1)
GPL1322 [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array
Samples (9)
GSM868317 CTL fly biological rep 1
GSM868318 CTL fly biological rep 2
GSM868319 CTL fly biological rep 3
BioProject PRJNA152777

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35439_Fold_change_all_entities.txt.gz 840.1 Kb (ftp)(http) TXT
GSE35439_RAW.tar 18.6 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data are available on Series record
Processed data provided as supplementary file

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