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Series GSE35468 Query DataSets for GSE35468
Status Public on Feb 02, 2012
Title Transcriptome profiling of epidermal differentiation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The aim of this study was to establish a deeply sequenced transcriptome at multiple timepoints during the differentiation of human epidermal keratinocytes from the progenitor state (d0). These transcriptomes were then assembled in order to discover novel genes and transcriptional events that are dynamically regulated during terminal differentiation of a human somatic tissue.
Overall design Paired-end RNA sequencing was performed on primary human keratinocytes at three timepoints during calcium-induced epidermal differentiation.
Contributor(s) Webster DE
Citation(s) 22302877
Submission date Feb 01, 2012
Last update date Oct 11, 2022
Contact name Douglas Porter
Organization name Stanford
Department Dermatology
Lab Khavari
Street address 269 Campus Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (3)
GSM869033 d0_kc_diff_1
GSM869034 d3_kc_diff_1
GSM869035 d6_kc_diff_1
This SubSeries is part of SuperSeries:
GSE58161 Suppression of progenitor differentiation requires the long noncoding RNA ANCR
SRA SRP010678
BioProject PRJNA152345

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35468_RAW.tar 321.9 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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