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| Status |
Public on Feb 18, 2012 |
| Title |
Gene expression in a wild type strain (FGSC 2489) versus an Dime-2 strain (FGSC 17937) in Neurospora crassa during nitrogen starvation |
| Organism |
Neurospora crassa |
| Experiment type |
Expression profiling by array
|
| Summary |
The protein kinase Ime2 is known to have an important role in meiosis in the yeast Saccharomyces cerevisiae. However, the Neurospora crassa IME2 homolog functions in self/nonself recognition as well as in the development of fungal sexual structures called protoperithecia. In N. crassa, protoperithecia are induced upon nitrogen starvation. We were interested in gene expression differences between an ime-2 deletion strain and a wild type strain, and due to the role of ime-2 during sexual development, carried out these arrays on media that was lacking in nitrogen.
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| Overall design |
There is one condition and three samples in this experiment (wild type and Dime-2 strains grown on minimal media lacking nitrogen), and dye swaps were performed
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| Contributor(s) |
Hutchison E, Glass NL |
| Citation(s) |
22813893 |
| |
| Submission date |
Feb 17, 2012 |
| Last update date |
Jun 25, 2013 |
| Contact name |
Elizabeth Ann Hutchison |
| E-mail(s) |
eah259@cornell.edu
|
| Organization name |
UC Berkeley
|
| Department |
Plant & Microbial Biology
|
| Lab |
N. L. Glass
|
| Street address |
111 Koshland Hall
|
| City |
Berkeley |
| State/province |
CA |
| ZIP/Postal code |
94720 |
| Country |
USA |
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| Platforms (1) |
| GPL13956 |
Glasslab Neurospora crassa 10k V1 |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA152003 |
