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Series GSE36156 Query DataSets for GSE36156
Status Public on Dec 18, 2012
Title Differential expression analysis of HFF cells in G0 phase compared to cells in G1 [MAT]
Organism Homo sapiens
Experiment type Expression profiling by genome tiling array
Summary Whole transcriptome differential expression analysis of HFF cells on Affymetrix Human Tiling 1.0 array set. Cells were synchronised by serum starvation and transcriptome-wide changes occurring at the transition from G0 phase to G1 phase detected. Expression data and fold changes were processed with MAT (Johnson et al., "Model-based analysis of tiling-arrays for ChIP-chip." Proc Natl Acad Sci USA, 103:12457-62, 2006.).
 
Overall design We analyzed one Affymetrix Human Tiling 1.0R set each for HFF cells in G0 phase and cells in G1 phase
 
Contributor(s) Reiche K, Böhlig L, Otto C, Kretzschmar A, Horn F, Hackermüller J, Engeland K
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Submission date Feb 29, 2012
Last update date Feb 25, 2013
Contact name Kristin Reiche
E-mail(s) kristin.reiche@izi.fraunhofer.de
Organization name Fraunhofer Institute for Cell Therapy and Immunology
Department Diagnostics
Street address Perlickstr. 1
City Leipzig
ZIP/Postal code 04103
Country Germany
 
Platforms (14)
GPL6156 [Hs35b_M01R] Affymetrix Human Tiling 1.0R Set, Array 1
GPL6157 [Hs35b_M02R] Affymetrix Human Tiling 1.0R Set, Array 2
GPL6158 [Hs35b_M03R] Affymetrix Human Tiling 1.0R Set, Array 3
Samples (14)
GSM881914 Whole transcriptome differential expression analysis of HFF cells using MAT (G0 phase versus G1 phase)_chipA
GSM881915 Whole transcriptome differential expression analysis of HFF cells using MAT (G0 phase versus G1 phase)_chipB
GSM881916 Whole transcriptome differential expression analysis of HFF cells using MAT (G0 phase versus G1 phase)_chipC
This SubSeries is part of SuperSeries:
GSE36187 Differential expression analysis of HFF cells in G0 phase compared to cells in G1 using MAT
Relations
BioProject PRJNA155765

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36156_CC_G0_G1_high_p5e-2_diff_p1e-6.bed.gz 37.8 Kb (ftp)(http) BED
GSE36156_RAW.tar 652.8 Mb (http)(custom) TAR (of CEL)
Processed data are available on Series record

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