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Series GSE36464 Query DataSets for GSE36464
Status Public on May 01, 2012
Title Study on the genomic changes in ColIa2 Cre x RBP-Jkappa loxp/loxp mice
Organism Mus musculus
Experiment type Genome variation profiling by genome tiling array
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Skin tumor formed in the ColIa2 Cre x RBP-Jkappa loxp/loxp mice was analyzed for genomic changes by comparing with normal tissues from the same mice.
Overall design Genomic DNA were isolated from each individual tumor and compared with the DNA extracted from the brain tissue in the same mouse.
Contributor(s) Hu B, Dotto GP
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Submission date Mar 13, 2012
Last update date Nov 19, 2014
Contact name Bing Hu
Organization name University of Lausanne
Department Department of Biochemistry
Street address Chemin des Boveresses 155
City Epalinges
ZIP/Postal code CH-1066
Country Switzerland
Platforms (1)
GPL11368 NimbleGen Mouse CGH Whole-Genome Tiling Array [080411_MM9_CGH_HX1]
Samples (9)
GSM894315 Tumor DNA from skin tumor epithelium 1.1
GSM894316 Tumor DNA from skin tumor epithelium 2.1
GSM894317 Tumor DNA from skin tumor epithelium 2.2
BioProject PRJNA153561

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36464_MM9_summary.xls.gz 6.1 Kb (ftp)(http) XLS
GSE36464_RAW.tar 985.9 Mb (http)(custom) TAR (of GFF, PAIR, TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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