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Series GSE406 Query DataSets for GSE406
Status Public on Apr 15, 2003
Title Heat shock - kin82 mutant and wildtype
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by array
Summary Wild type and kin82 mutant under heat shock.

Cells grown at 25°C were collected by centrifugation, resuspended in an equal volume of 37°C medium, and returned to 37°C for growth. Samples were collected at 0, 5, 15, 30 and 60 minutes after transfer to 37°C.

Experimental samples were used to generate Cy5-labeled cDNA probes, whereas mRNA reference pools extracted from cultures of the respective strains grown to early log phase under normal conditions, were used to generate Cy3-labeled cDNA probes. Cy5- and Cy3-labeled probes were hybridized together to microarrays printed with PCR-amplified fragments, representing 6280 of the Saccharomyces cerevisiae ORFs.
Keywords: time-course
 
 
Contributor(s) Segal E, Shapira M, Regev A, Pe'er D, Botstein D, Koller D, Friedman N
Citation(s) 12740579
Submission date Apr 15, 2003
Last update date Feb 23, 2012
Contact name Eran Segal
E-mail(s) eran@cs.stanford.edu
Phone 650-725-8784
URL http://cs.stanford.edu/~eran
Organization name Stanford University
Department Computer Science
Street address Gates Building 1A
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platforms (1)
GPL287 Segal_1
Samples (10)
GSM6004 DBY8778_heat_shock2_0min
GSM6005 delKIN82_heat shock_60min_repeat
GSM6006 DBY8778_heat_shock2_5min
Relations
BioProject PRJNA84953

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided

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