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Series GSE41128 Query DataSets for GSE41128
Status Public on Apr 01, 2013
Title Stress-associated H3K4 methylation accumulates during postnatal development and aging of Rhesus macaque brain
Organism Macaca mulatta
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We examined the histone modification H3K4 dimethylation (H3K4me2) in the prefrontal cortex of individual Rhesus macaques at different ages by chromatin immunoprecipitation, followed by deep sequencing (ChIP-seq) at the whole genome level
Overall design Four Rhesus macaque prefrontal cortex samples with 0.4, 9,22 and 26 years old were used for H3K4me2 ChIP-Seq
Contributor(s) Han Y, Han D, Han JJ
Citation(s) 22978322
Submission date Sep 25, 2012
Last update date May 15, 2019
Contact name Dali Han
Organization name University of Chicago
Department Department of Chemisty
Street address 5801 South Ellis Avenue
City Chicago
State/province IL
ZIP/Postal code 60637
Country USA
Platforms (1)
GPL9160 Illumina Genome Analyzer II (Macaca mulatta)
Samples (5)
GSM1008952 H3K4me2_0.4yr
GSM1008953 H3K4me2_9yr
GSM1008954 H3K4me2_22yr
BioProject PRJNA175867
SRA SRP015879

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41128_RAW.tar 477.6 Mb (http)(custom) TAR (of BED)
GSE41128_summary4_H3K4me2-W200-G400-islands-summary-FDR1e-3_peak.txt.gz 1.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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