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Series GSE41956 Query DataSets for GSE41956
Status Public on Aug 02, 2013
Title Transcriptome analysis of A661 leaves
Organism Zea mays
Experiment type Expression profiling by array
Summary The maize inbred line A661 shows a characteristic phenotype when grown at suboptimal temperatures for three weeks and then is exposed to optimal temperatures for one extra week. After this period the third leaf showed two well defined sections: distal (chlorophyll-less; CL) and proximal (chlorophyll-containing; CC) sections. To further investigate the performance of the inbred line A661 under cold conditions a gene expression profiling analysis was conducted using large scale maize microarrays. A total of 1002 transcripts change their expression between both leaf sections and the majority of these codify for proteins located to the chloroplast.
Overall design Three biological replicates of each leaf sections were analysed. The CC section was used as control.
Contributor(s) Rodríguez VM, Velasco P, Revilla P, Butrón A
Citation(s) 23881393
Submission date Oct 31, 2012
Last update date Aug 02, 2013
Contact name Victor M Rodriguez
Organization name Mision Biologica de Galicia (CSIC)
Department Plant Genetics and Breeding
Street address Apartado 28
City Pontevedra
ZIP/Postal code E-36080
Country Spain
Platforms (1)
GPL4032 [Maize] Affymetrix Maize Genome Array
Samples (6)
GSM1028155 Leaf_CL_rep1
GSM1028156 Leaf_CL_rep2
GSM1028157 Leaf_CL_rep3
BioProject PRJNA178584

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Supplementary file Size Download File type/resource
GSE41956_RAW.tar 11.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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