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Series GSE44019 Query DataSets for GSE44019
Status Public on Sep 19, 2013
Title Affymetrix SNP array data for metastatic melanoma specimens
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary Comparison between the copy number of differentially methylated sites between lymph node metastasis from melanoma patients with good prognosis and melanoma brain metastasis. All samples are taken from different patients, and were established as cell lines in the John Wayne Cancer Institute.
Overall design Sixteen metastatic melanomas were run on Affymetrix Genome-Wide Human SNP Array 6.0. Lymph node metastases and brain metastases genetic copy number variations were compared.
Contributor(s) Huang S, Hoon D
Citation(s) 24014427, 26016895
Submission date Feb 01, 2013
Last update date Mar 16, 2021
Contact name Dave S.B. Hoon
Organization name Saint John's Cancer Institute
Department Translational Molecular Medicine
Street address 2200 Santa Monica Boulevard
City Santa Monica
State/province CA
ZIP/Postal code 90403
Country USA
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (16)
GSM1076709 Lymph node metastasis 1
GSM1076710 Lymph node metastasis 2
GSM1076711 Lymph node metastasis 3
BioProject PRJNA188324

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44019_RAW.tar 1.2 Gb (http)(custom) TAR (of CEL, CHP, CNCHP)
Processed data included within Sample table
Processed data provided as supplementary file

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