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Series GSE44698 Query DataSets for GSE44698
Status Public on Feb 28, 2013
Title Global analyses of how 3' UTR-isoform choice influences mRNA stability and translational efficiency
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We obtained global measurements of decay and translation rates for mammalian mRNAs with alternative 3' untranslated regions (3' UTRs).
Overall design 1 3P-Seq sample from 3T3 cells and 1 3P-Seq sample from mouse ES cells; 2 2P-Seq steady state and 4 2P-Seq with actinomycin D; 6 polysome fraction 2P-Seq
Contributor(s) Spies N, Burge CB, Bartel DP
Citation(s) 24072873
Submission date Feb 26, 2013
Last update date May 15, 2019
Contact name Noah Spies
Organization name Stanford University
Department Pathology
Lab Arend Sidow
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
Platforms (2)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (14)
GSM1089083 3T3 3P-Seq
GSM1089084 mES 3P-Seq
GSM1089085 2P-Seq control 1
BioProject PRJNA191095
SRA SRP018886

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44698_processed.txt.gz 1015.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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