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Series GSE44918 Query DataSets for GSE44918
Status Public on Dec 08, 2014
Title High resolution nulceotide level methylation map of female mouse primary keratinocytes
Organism Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Summary We determined the high resolution methylation maps of female mouse primary keratinocytes and compared these maps at nucleotide level with the female mouse primary dermal fibroblasts. Single nucleotide level methylation maps led us to identify several additional features of CG methylation. We have detected that differentially methylated regions are epigenetically marked in other cells including embryonic stem cells and neuronal progeniator cells. Different new charecteristics and functions were also discovered with these methylation maps.
Overall design Determinationof whole genome DNA methylation profiles (BS-seq) of primary mouse keratinocytes
Contributor(s) Chatterjee R, Vinson C
Citation(s) 25506399, 25699092
Submission date Mar 06, 2013
Last update date Jul 31, 2019
Contact name Raghunath Chatterjee
Organization name Indian Statistical institute
Department Human Genetics Unit
Street address 203 BT Road, HGU, Indian Statistical Institute
City Kolkata
State/province WB
ZIP/Postal code 700108
Country India
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (1)
GSM1093912 Ker_BS-seq
BioProject PRJNA192599
SRA SRP018963

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44918_RAW.tar 207.1 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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