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Series GSE45599 Query DataSets for GSE45599
Status Public on Mar 29, 2013
Title Mock, latent, and lytic rKSHV.219-infected iSLK cells [Expt3]
Platform organisms Homo sapiens; Human herpesvirus 8 type M
Sample organisms Homo sapiens; Human gammaherpesvirus 8; Human herpesvirus 8 strain rKSHV.219
Experiment type Expression profiling by genome tiling array
Summary Expression profiling of stably infected epithelial cells using a custom tiling microarray. iSLK was infected with rKSHV.219 and selected with puromycin. Mock infected iSLK served as control for iSLK.219. Lytic reactivation of iSLK.219 was induced with 1 ug/mL doxycycline for 48 hours.
 
Overall design Three condition experiment: mock infected, latently infected, and lytically induced rKSHV.219-infected iSLK cells.
 
Contributor(s) Chang HH, Ganem D
Citation(s) 23601105
Submission date Mar 28, 2013
Last update date Jun 28, 2013
Contact name Henry H Chang
E-mail(s) changh88@gmail.com
Organization name Novartis Institutes for BioMedical Research
Department Infectious Diseases Group
Street address 4560 Horton Street
City Emeryville
State/province CA
ZIP/Postal code 94608
Country USA
 
Platforms (1)
GPL10083 KSHV tiling microarray AMADID: 017577
Samples (3)
GSM1110335 mock infected inducible SLK (uninfected)
GSM1110336 latently rKSHV.219-infected inducible SLK
GSM1110337 lytically induced rKSHV.219-infected inducible SLK
This SubSeries is part of SuperSeries:
GSE45600 A unique herpesviral transcriptional program in KSHV-infected lymphatic endothelial cells leads to mTORC1 activation and rapamycin sensitivity
Relations
BioProject PRJNA195249

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45599_RAW.tar 42.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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