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Series GSE46377 Query DataSets for GSE46377
Status Public on Mar 25, 2016
Title 24-epibrassinolide regulates the expression of miRNAs in Arabidopsis thaliana
Organism Arabidopsis thaliana
Experiment type Non-coding RNA profiling by array
Summary Brassinosteroids (BRs) are endogenous plant hormones and essential for normal plant growth and development. MicroRNAs (miRNAs) of Arabidopsis thaliana are involved in mediating cell proliferation in leaves, stress tolerance, and root development. The specifics of BRs mechanisms involving miRNAs are unknown. To explore the role of miRNAs in BR-mediated pathways, we analyzed differences in miRNA profiles between control (mock solution) and 24-epibrassinolide (EBR) treatments from customized miRNA microarrays.
 
Overall design Seedlings were separately cultured under exogenous 10 nM EBR treatments for 30 (EBR30) or 180 (EBR180) minutes, and total RNAs of all seedlings were extracted after seven days of growth. Two independent experiments were performed at each time (30 or 180 minutes).
 
Contributor(s) Lin L, Wu C, Huang H, Chen H, Hsieh H, Juan H
Citation(s) 23839095
Submission date Apr 25, 2013
Last update date Jun 24, 2016
Contact name Hsueh-Fen Juan
Organization name National Taiwan university
Department institute of molecular and cellular biology
Street address No. 1, Sec. 4, Roosevelt Road
City Taipei
ZIP/Postal code 10617
Country Taiwan
 
Platforms (1)
GPL17065 Agilent custom Arabidopsis miRNA array
Samples (8)
GSM1129430 DMSO_30 min_1
GSM1129431 EBR_30 min_1
GSM1129432 DMSO_180 min_1
Relations
BioProject PRJNA198865

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46377_RAW.tar 6.2 Mb (http)(custom) TAR (of XLS)
Processed data included within Sample table
Processed data provided as supplementary file

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