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Series GSE48298 Query DataSets for GSE48298
Status Public on Jun 04, 2014
Title Transcriptome analysis of mesothelioma induced by intraperitoneal injections of asbestos in rats
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Human malignant mesothelioma (MM) is an aggressive tumor strongly associated with asbestos exposure. SM patients generally have poorer prognosis compared to EM patients. To identify potential genes accounting for the differential prognosis between these two subtypes, we compared the microarray gene expression profiles of rat SM and EM tissues induced by intraperitoneal injections of 3 types of asbestos (chrysotile,crocidolite and amosite).
 
Overall design Carcinogenesis protocol was performed using specific pathogen-free male and female F1 hybrid rats between Fischer344 and Brown-Norway strains. A total of 28 microarrays (Whole Rat Genome Microarray) were used for screening purpose: The 2 arrays were used for knife-scraped peritoneal mesothelial cells, 2 arrays for cultured peritoneal mesothelial cells and 24 arrays for MM samples.
 
Contributor(s) Toyokuni S, Jiang L, Yamashita Y, Akatsuka S
Citation(s) 24839947, 27602956
Submission date Jun 26, 2013
Last update date Jul 10, 2019
Contact name Shinya Toyokuni
E-mail(s) akatsuka@med.nagoya-u.ac.jp
Organization name Nagoya University
Department Pathology
Street address 65 Tsuruma-Cho, Showa-Ku
City Nagoya
State/province Aichi
ZIP/Postal code 466-8550
Country Japan
 
Platforms (1)
GPL7294 Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Probe Name version)
Samples (28)
GSM1174347 Malignant Mesothelioma_Amo1_SM
GSM1174348 Malignant Mesothelioma_Amo2_SM
GSM1174349 Malignant Mesothelioma_Amo3_BM
Relations
BioProject PRJNA209590

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48298_RAW.tar 216.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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