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Series GSE48517 Query DataSets for GSE48517
Status Public on Dec 25, 2013
Title PAR-CLIP for JARID2 in mouse embryonic stem cells
Organism Mus musculus
Experiment type Other
Summary This experiment was designed to identify RNAs making direct contact with JARID2 in mouse embryonic stem cells
 
Overall design E14 cells were pulsed with 4-SU, irradiated with UV, and subjected to JARID2 immunoprecipitation.
 
Contributor(s) Kaneko S, Bonasio R, Reinberg D
Citation(s) 24374312
Submission date Jul 03, 2013
Last update date Feb 04, 2022
Contact name Roberto Bonasio
Organization name University of Pennsylvania
Department Cell and Developmental Biology
Lab Bonasio
Street address 3400 Civic Center Blvd - SCTR 9-111
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (4)
GSM1180174 E14.JARID2.NT.115k.b1
GSM1180175 E14.JARID2.NT.190k.b1
GSM1180176 E14.JARID2.RNAse.115k.b1
This SubSeries is part of SuperSeries:
GSE48518 Interactions between JARID2 and noncoding RNAs regulate PRC2 recruitment to chromatin
Relations
BioProject PRJNA210417
SRA SRP026534

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48517_E14.JARID2.b1f.RCS.bed.gz 56.6 Kb (ftp)(http) BED
GSE48517_E14_HA-EZH2.HA.f.RCS.bed.gz 260.9 Kb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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