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Status |
Public on Jun 01, 2006 |
Title |
Cotton promoter discovery |
Organism |
Gossypium hirsutum |
Experiment type |
Expression profiling by array
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Summary |
Genomic approaches to the discovery of promoters for sustained expression in cotton (Gossypium hirsutum L.) under field conditions: expression analysis in transgenic cotton and Arabidopsis of a Rubisco small subunit promoter identified using EST sequence analysis and cDNA microarrays. Keywords: Promoter Discovery
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Overall design |
RNAs from 8-week old plants were compared to RNAs from 10-, 14-, 20- and 22-week old plants on separate arrays each with a dye swap. The 20 and 22 weeks hybridisations each had a biological replicate (each with a dye swap) as well as a second independent hybridisation (with dye swap) with one of the 22 week RNAs. One of the 22-week slides was of low quality and had to be discarded.
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Contributor(s) |
Amarasinghe R, Llewellyn DJ |
Citation missing |
Has this study been published? Please login to update or notify GEO. |
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Submission date |
May 30, 2006 |
Last update date |
Sep 26, 2014 |
Contact name |
Andrew Spriggs |
E-mail(s) |
andrew.spriggs@csiro.au
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Phone |
612-6246-5193
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Organization name |
CSIRO Plant Industry
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Department |
Bioinformatics Group
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Street address |
GPO Box 1600
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City |
Canberra |
State/province |
ACT |
ZIP/Postal code |
2601 |
Country |
Australia |
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Platforms (1) |
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Samples (13)
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GSM111276 |
8weeks v 22weeks, LSL07Ascan1.gpr |
GSM111277 |
8weeks v 22weeks, LSL07Bscan1.gpr |
GSM111278 |
8weeks v 10weeks, LSL02Ascan1.gpr |
GSM111279 |
8weeks v 10weeks, LSL02Bscan1.gpr |
GSM111280 |
8weeks v 14weeks, LSL03Ascan1.gpr |
GSM111281 |
8weeks v 14weeks, LSL03Bscan1.gpr |
GSM111282 |
8weeks v 20weeks, LSL04Ascan1.gpr |
GSM111283 |
8weeks v 20weeks, LSL04Bscan2.gpr |
GSM111284 |
8weeks v 20weeks, LSL05Ascan1.gpr |
GSM111285 |
8weeks v 20weeks, LSL05Bscan1.gpr |
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Relations |
BioProject |
PRJNA95895 |
Supplementary data files not provided |
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