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Series GSE50450 Query DataSets for GSE50450
Status Public on Dec 31, 2014
Title Deep sequencing of small RNA libraries reveals dynamic expression patterns of miRNAs in multiple developmental stages of Bactrocera dorsalis
Organism Bactrocera dorsalis
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Four developmental stage small RNA libraries including Eggs, Larvae, Pupae and Adults were constructed, where a lot of known miRNAs were identified and many novel miRNAs were predicted. Comparison of their expression profiles in the four libraries suggested that Bactrocera dorsalis miRNAs are dynamically regulated throughout the life cycle.Further analysis of the expression and function of these miRNAs could increase our understanding of regulatory networks in the insect and lead to novel approaches to its control.
 
Overall design The total RNAs from eggs, larvae, pupae and adults stages of Bactrocera dorsalis were used to construct small RNA libraries for Solexa sequencing.The data from Solexa sequencer (Illumina) was compared to identify small RNAs in different stages of Bactrocera dorsalis.
 
Contributor(s) Huang Y, Dou W, Wang J
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 29, 2013
Last update date May 15, 2019
Contact name Yong Huang
E-mail(s) zhugezhengwu@163.com
Organization name Southwest University
Street address Tiansheng Road
City Chongqing
ZIP/Postal code 400716
Country China
 
Platforms (1)
GPL17657 Illumina Genome Analyzer (Bactrocera dorsalis)
Samples (4)
GSM1219432 Eggs
GSM1219433 Larvae
GSM1219434 Pupae
Relations
BioProject PRJNA217508
SRA SRP029337

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE50450_processed_data_matrix.txt.gz 62.2 Kb (ftp)(http) TXT
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Processed data are available on Series record

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