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Series GSE51842 Query DataSets for GSE51842
Status Public on Jan 01, 2014
Title microRNAs profiling in hippocampal cells of Self-Sustaining Status Epilepticus (SSSE) mouse model
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus; Human alphaherpesvirus 1; Human alphaherpesvirus 2; Human betaherpesvirus 5; human gammaherpesvirus 4; JC polyomavirus; Human immunodeficiency virus 1; Murid gammaherpesvirus 4; Human gammaherpesvirus 8; Merkel cell polyomavirus; Mus musculus cytomegalovirus 2; Betapolyomavirus hominis; Betapolyomavirus macacae
Sample organism Mus musculus
Experiment type Non-coding RNA profiling by array
Summary Status Epilepticus (SE) is induced in mice (C57Bl/6J) through electrical stimulation (90min, 100 ms trains of 1 ms, 2 trains per 1 s, 250 μA peak current intensity). RNA was extracted from the hippocampi at 24 h and 28 d after induction. In wild-type RNA was extracted on the 22nd day. microRNA expressions were measured via microarray technology using Exiqon's miCURY™ LNA Arrays.
Overall design 3 conditions, SSSE mouse model at 24 h and 28 d, and a control group, each of 8 replicates.
Contributor(s) Kretschmann A, Danis B, Andonovic L, Abnaof K, van Rikxoort M, Siegel F, Mazzuferi M, Godard P, Hanon E, Fröhlich H, Kaminski RM, Foerch P, Pfeifer A
Citation(s) 25078263
Submission date Oct 29, 2013
Last update date Jun 17, 2019
Contact name Khalid A. Abnaof
Organization name Bonn-Aachen International Centre for Information Technology (B-IT)
Department Algorithmic Bioinformatics
Street address Dahlmann Straße 2
City Bonn
State/province North Rhine-Westfalina
ZIP/Postal code 53113
Country Germany
Platforms (1)
GPL11432 miRCURY LNA microRNA Array, 5th generation - hsa, mmu & rno
Samples (24)
GSM1253658 SSSENaive_SN_rep_1
GSM1253659 SSSENaive_SN_rep_2
GSM1253660 SSSENaive_SN_rep_3
BioProject PRJNA225589

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51842_RAW.tar 38.2 Mb (http)(custom) TAR (of TXT)
GSE51842_normalized.txt.gz 785.9 Kb (ftp)(http) TXT
Processed data are available on Series record

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