NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE53353 Query DataSets for GSE53353
Status Public on Mar 04, 2014
Title A lack of secretory leukocyte protease inhibitor (SLPI) causes defects in granulocytic differentiation.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Expression data from CD34+ hematopoietic cells transduced with control or anti-SLPI shRNA, serum starved and treated with G-CSF.
 
Overall design CD34+ hematopoietic cells were isolated from the bone marrow of healthy individuals, transduced with lenitvirus-based RFP-expressed shRNA constructs targeting SLPI mRNA or scrambled control shRNA. After 3 days of the transductions, RFP+ cells were sorted, serum starved for 24 hours and treated with G-CSF 10 ng/ml for 18 hours. Total RNA of sorted cells was isolated and used for Affymetrix Exome arrays.
 
Contributor(s) Skokowa J, Klimenkova O
Citation(s) 24352879
Submission date Dec 16, 2013
Last update date Jul 26, 2018
Contact name Siarhei Kandabarau
E-mail(s) kandabarau.siarhei@mh-hannover.de
Organization name Hannover Medical School
Street address Carl-Neuberg-Str 1
City Hannover
ZIP/Postal code 30625
Country Germany
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (4)
GSM1289965 CD34+ cells, ctrl shRNA 1
GSM1289966 CD34+ cells, ctrl shRNA 2
GSM1289967 CD34+ cells, SLPI shRNA 1
Relations
BioProject PRJNA231777

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53353_RAW.tar 17.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap