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Series GSE56244 Query DataSets for GSE56244
Status Public on Jul 22, 2014
Title Small RNAs from four Drosophila melanogaster-subgroup species
Organisms Drosophila erecta; Drosophila sechellia; Drosophila simulans; Drosophila yakuba
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Curration of small RNAs from four melanogaster-subgroup species (Drosophila simulans, Drosophila sechellia, Drosophila erecta, and Drosophila yakuba) for the purpose of non-coding RNA annotation and comparative genomics assessment.
 
Overall design Non-replicated small RNA samples from four melanogaster-subgroup species.
 
Contributor(s) Mohammed J, Flynt AS, Lai EC
Citation(s) 24942624
Submission date Mar 26, 2014
Last update date May 15, 2019
Contact name Jaaved Mohammed
E-mail(s) jaavedm@stanford.edu
Organization name Stanford University
Department Chemical and Systems Biology
Lab Joanna Wysocka
Street address 265 Campus Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platforms (4)
GPL9321 Illumina Genome Analyzer II (Drosophila erecta)
GPL10061 Illumina Genome Analyzer II (Drosophila yakuba)
GPL10071 Illumina Genome Analyzer II (Drosophila sechellia)
Samples (4)
GSM1357618 Drosophila simulans male body small RNA
GSM1357619 Drosophila sechellia male body small RNA
GSM1357620 Drosophila yakuba male body small RNA
Relations
BioProject PRJNA242736
SRA SRP040593

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56244_RAW.tar 46.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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