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Series GSE56248 Query DataSets for GSE56248
Status Public on Apr 04, 2014
Title A Smooth Muscle-Like Origin for Beige Adipocytes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary A comparison of the translating RNAs in UCP1-positive cells from the classical BAT, the inguinal WAT, and the perigonadal WAT. We find genes common to all UCP1-positive cells independent of anatomical location, as well as genes specifically enriched in one group versus the others. Results provide a portrait of gene expression in UCP1-positive cells in vivo.
 
Overall design Translating RNAs in UCP1-positive cells were purified from 6 week old female UCP1-TRAP mice after 2 weeks at 4 degC. N=3 for iWAT, N=2 for pgWAT, and N=3 for BAT.
 
Contributor(s) Long JZ, Spiegelman BM
Citation(s) 24709624
Submission date Mar 26, 2014
Last update date May 15, 2019
Contact name Jonathan Z Long
E-mail(s) jonathanz_long@dfci.harvard.edu
Organization name Dana-Farber Cancer Institute
Street address 3 Blackfan Circle, Rm 11115
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM1357676 iWAT_1
GSM1357677 iWAT_2
GSM1357678 iWAT_3
Relations
BioProject PRJNA242742
SRA SRP040594

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56248_RAW.tar 31.9 Mb (http)(custom) TAR (of GTF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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