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Series GSE60320 Query DataSets for GSE60320
Status Public on Aug 01, 2016
Title Comparison of gene expression in the intestinal metaplasia in Cdx2/IL-1beta mice vs IL-1beta alone
Organism Mus musculus
Experiment type Expression profiling by array
Summary Cdx2/IL-1beta mice have less intestinal metaplasia at the squamocolumnar junction thanIL-1beta mice alone.
This study was to identify a mechanism for this effect by examining differences in gene expression patterns when Cdx2 is co-expressed.
 
Overall design We dissected out intestinal metaplasia nodules from the squamocolumnar junction in Cdx2/IL-1beta mice and Il-1beta mice and measured gene expression on a Mouse Gene 2.0ST Affymetrix array in Oct 2013.
 
Contributor(s) Lynch JP, Kong J
Citation(s) 26460825
Submission date Aug 11, 2014
Last update date Feb 21, 2018
Contact name John P. Lynch
Organization name University of Pennsylvania
Department Medicine
Lab 912 BRB
Street address 421 Curie Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (6)
GSM1471654 Cdx2/IL-1B 52540  
GSM1471655 Cdx2/IL-1B 52541  
GSM1471656 Cdx2/IL-1B 52542  
Relations
BioProject PRJNA258020

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60320_RAW.tar 59.7 Mb (http)(custom) TAR (of CEL)
GSE60320_results4944.xlsx.gz 8.9 Mb (ftp)(http) XLSX
Processed data included within Sample table
Processed data are available on Series record

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