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Series GSE60450 Query DataSets for GSE60450
Status Public on Jan 19, 2015
Title Transcriptome analysis of luminal and basal cell subpopulations in the lactating versus pregnant mammary gland
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To identify genes specifically expressed in lactating mammary glands, the gene expression profiles of luminal and basal cells from different developmental stages were compared.
 
Overall design Comparison of gene expression in luminal and basal cells harvested from the mammary glands of virgin, 18.5 day pregnant and 2 day lactating mice (2 mice per stage).
 
Contributor(s) Fu NY, Lun A, Smyth GK, Visvader JE
Citation(s) 25730472
Submission date Aug 15, 2014
Last update date May 15, 2019
Contact name Gordon K Smyth
E-mail(s) smyth@wehi.edu.au
Phone (+61 3) 9345 2326
Fax (+61 3) 9347 0852
URL http://www.wehi.edu.au
Organization name Walter and Eliza Hall Institute of Medical Research
Department Bioinformatics
Lab Smyth
Street address 1G Royal Pde
City Parkville
State/province Vic
ZIP/Postal code 3052
Country Australia
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (12)
GSM1480291 Luminal virgin #1
GSM1480292 Luminal virgin #2
GSM1480293 Luminal 18.5 dP #1
Relations
BioProject PRJNA258286
SRA SRP045534

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60450_Lactation-GenewiseCounts.txt.gz 501.6 Kb (ftp)(http) TXT
GSE60450_RAW.tar 2.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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