|
| Status |
Public on Mar 22, 2015 |
| Title |
Neurospora importin alpha compromises H3K9me3 and cytosine methylation levels through inappropriate localization of the heterochromatin machinery |
| Organism |
Neurospora crassa |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
25793375 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 GM035690 |
Genetic Aspects of DNA Methylation |
UNIVERSITY OF OREGON |
SELKER |
| R37 GM035690 |
Genetic Aspects of DNA Methylation |
UNIVERSITY OF OREGON |
SELKER |
| F32 GM097821 |
Genetic analysis of DNA methylation in Neurospora crassa |
UNIVERSITY OF OREGON |
KLOCKO |
|
| |
| Submission date |
Sep 05, 2014 |
| Last update date |
Feb 11, 2021 |
| Contact name |
Andrew David Klocko |
| E-mail(s) |
aklocko@uccs.edu
|
| Phone |
719-255-3255
|
| Organization name |
University of Colorado Colorado Springs
|
| Department |
Chemistry and Biochemistry
|
| Lab |
Klocko
|
| Street address |
278 Centennial Hall, 1420 Austin Bluffs Pkwy
|
| City |
Colorado Springs |
| State/province |
Colorado |
| ZIP/Postal code |
80918 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16164 |
Illumina HiSeq 2000 (Neurospora crassa) |
|
| Samples (5)
|
|
| This SuperSeries is composed of the following SubSeries: |
| GSE61173 |
H3K9me3 ChIP-seq from Neurospora crassa wild type (WT) and dim-3 (severely reduced H3K9me3 levels) strains |
| GSE61174 |
Bisulfite-seq from Neurospora crassa a wild type (WT) strain grown in minimum medium, a dim-3 strain grown in minimum medium, and a dim-3 strain grown with supplemented histidine |
|
| Relations |
| BioProject |
PRJNA260400 |
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