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Series GSE63680 Query DataSets for GSE63680
Status Public on Nov 27, 2014
Title Kc167 Mcm2-7 Localization in HU
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary Determination of the genome-wide distribution of the Mcm2-7 helicase by chromatin immunoprecipitation in the Drosophila Kc167 cell line at the beginning of S phase. Kc167 cells were arrested at the G1/S transition with hydroxyurea (HU). Goal was to evaluate changes in the genome-wide Mcm2-7 distribution throughout the cell cycle, and how this relates to the excess Mcm2-7 loaded onto chromatin in G1.
 
Overall design ChIP-Chip of Mcm2-7 in HU compared to input genomic DNA. Biological Replicates: 2
 
Contributor(s) Belsky JA, MacAlpine DM
Citation(s) 25555795
Submission date Nov 26, 2014
Last update date Feb 27, 2015
Contact name Jason Alan Belsky
E-mail(s) jason.belsky@duke.edu
Organization name Duke University
Department Pharmacology and Cancer Biology
Lab David MacAlpine Lab
Street address LSRC Room C333
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
 
Platforms (4)
GPL8141 Agilent_Dm_4.3_112_tiling_a
GPL8142 Agilent_Dm_4.3_112_tiling_b
GPL8235 Agilent_Dm_4.3_112_tiling_c
Samples (8)
GSM1555159 Kc Mcm2-7 HU Replicate 1 Array 1
GSM1555160 Kc Mcm2-7 HU Replicate 1 Array 2
GSM1555161 Kc Mcm2-7 HU Replicate 1 Array 3
This SubSeries is part of SuperSeries:
GSE63915 Evaluation of ORC and Mcm2-7 Distribution Throughout the Drosophila Kc Cell Cycle
Relations
BioProject PRJNA268681

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63680_RAW.tar 542.3 Mb (http)(custom) TAR (of TXT)
GSE63680_agilent_matrix_output.tsv.gz 10.4 Mb (ftp)(http) TSV
GSE63680_kc_mcm_hu_1_532.txt.gz 11.1 Mb (ftp)(http) TXT
GSE63680_kc_mcm_hu_1_635.txt.gz 11.1 Mb (ftp)(http) TXT
GSE63680_kc_mcm_hu_2_532.txt.gz 11.1 Mb (ftp)(http) TXT
GSE63680_kc_mcm_hu_2_635.txt.gz 11.1 Mb (ftp)(http) TXT
GSE63680_kc_mcm_hu_ma2c_peaks.bed.gz 116 b (ftp)(http) BED
GSE63680_kc_mcm_hu_ma2c_score.wig.gz 5.7 Mb (ftp)(http) WIG
Processed data are available on Series record

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