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GEO help: Mouse over screen elements for information. |
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Status |
Public on Jun 01, 2015 |
Title |
Human embryonic stem cell based neuro-developmental toxicity assay: response to valproic acid and carbamazepine exposure |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by array
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Summary |
Here we studied the effects of anticonvulsant drug exposure in a human embryonic stem cell (hESC) based neuro- developmental toxicity test (hESTn). During neural differentiation the cells were exposed, for either 1 or 7 days, to non-cytotoxic concentration ranges of valproic acid (VPA) or carbamazepine (CBZ), anti-epileptic drugs known to cause neurodevelopmental toxicity.
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Overall design |
93 samples (multiple time points, multiple exposures, multiple concentrations, multiple replicates)
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Contributor(s) |
Pennings J |
Citation(s) |
25979313 |
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Submission date |
Dec 12, 2014 |
Last update date |
Jun 02, 2015 |
Contact name |
Jeroen Pennings |
E-mail(s) |
Jeroen.Pennings@rivm.nl
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Phone |
+31 88 689 2214
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Organization name |
Natl. Inst. Public Health & Environment
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Street address |
A. van Leeuwenhoeklaan 9
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City |
Bilthoven |
ZIP/Postal code |
3721MA |
Country |
Netherlands |
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Platforms (1) |
GPL15798 |
Affymetrix HT HG-U133+ PM Array Plate [CDF: HTHGU133PlusPM_Hs_ENTREZG_v14] |
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Samples (93)
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GSM1564838 |
0 days, unexposed, nr4 |
GSM1564839 |
0 days, unexposed, nr5 |
GSM1564840 |
0 days, unexposed, nr6 |
GSM1564841 |
1 days, unexposed, nr1 |
GSM1564842 |
1 days, unexposed, nr2 |
GSM1564843 |
1 days, unexposed, nr3 |
GSM1564844 |
1 days, unexposed, nr4 |
GSM1564845 |
1 days, unexposed, nr5 |
GSM1564846 |
4 days, unexposed, nr1 |
GSM1564847 |
4 days, unexposed, nr2 |
GSM1564848 |
4 days, unexposed, nr3 |
GSM1564849 |
4 days, unexposed, nr4 |
GSM1564850 |
7 days, unexposed, nr1 |
GSM1564851 |
7 days, unexposed, nr2 |
GSM1564852 |
7 days, unexposed, nr3 |
GSM1564853 |
7 days, unexposed, nr4 |
GSM1564854 |
7 days, unexposed, nr5 |
GSM1564855 |
7 days, unexposed, nr6 |
GSM1564856 |
9 days, unexposed, nr1 |
GSM1564857 |
9 days, unexposed, nr2 |
GSM1564858 |
11 days, unexposed, nr1 |
GSM1564859 |
11 days, unexposed, nr2 |
GSM1564860 |
11 days, unexposed, nr3 |
GSM1564861 |
11 days, unexposed, nr4 |
GSM1564862 |
1 days, DMSO, nr1 |
GSM1564863 |
1 days, DMSO, nr2 |
GSM1564864 |
1 days, DMSO, nr3 |
GSM1564865 |
1 days, DMSO, nr4 |
GSM1564866 |
1 days, DMSO, nr5 |
GSM1564867 |
1 days, DMSO, nr6 |
GSM1564868 |
7 days, DMSO, nr1 |
GSM1564869 |
7 days, DMSO, nr2 |
GSM1564870 |
7 days, DMSO, nr3 |
GSM1564871 |
7 days, DMSO, nr4 |
GSM1564872 |
7 days, DMSO, nr5 |
GSM1564873 |
7 days, DMSO, nr6 |
GSM1564874 |
1 days, carbamazepine 0.033 mM, nr1 |
GSM1564875 |
1 days, carbamazepine 0.033 mM, nr2 |
GSM1564876 |
1 days, carbamazepine 0.1 mM, nr1 |
GSM1564877 |
1 days, carbamazepine 0.1 mM, nr2 |
GSM1564878 |
1 days, carbamazepine 0.1 mM, nr3 |
GSM1564879 |
1 days, carbamazepine 0.1 mM, nr4 |
GSM1564880 |
1 days, carbamazepine 0.1 mM, nr5 |
GSM1564881 |
1 days, carbamazepine 0.1 mM, nr6 |
GSM1564882 |
1 days, carbamazepine 0.33 mM, nr2 |
GSM1564883 |
1 days, carbamazepine 0.33 mM, nr3 |
GSM1564884 |
1 days, carbamazepine 0.33 mM, nr4 |
GSM1564885 |
1 days, carbamazepine 0.33 mM, nr5 |
GSM1564886 |
1 days, carbamazepine 0.33 mM, nr6 |
GSM1564887 |
7 days, carbamazepine 0.033 mM, nr1 |
GSM1564888 |
7 days, carbamazepine 0.033 mM, nr2 |
GSM1564889 |
7 days, carbamazepine 0.1 mM, nr1 |
GSM1564890 |
7 days, carbamazepine 0.1 mM, nr2 |
GSM1564891 |
7 days, carbamazepine 0.1 mM, nr3 |
GSM1564892 |
7 days, carbamazepine 0.1 mM, nr4 |
GSM1564893 |
7 days, carbamazepine 0.1 mM, nr5 |
GSM1564894 |
7 days, carbamazepine 0.1 mM, nr6 |
GSM1564895 |
7 days, carbamazepine 0.33 mM, nr1 |
GSM1564896 |
7 days, carbamazepine 0.33 mM, nr2 |
GSM1564897 |
7 days, carbamazepine 0.33 mM, nr3 |
GSM1564898 |
7 days, carbamazepine 0.33 mM, nr4 |
GSM1564899 |
7 days, carbamazepine 0.33 mM, nr6 |
GSM1564900 |
1 days, valproic acid 0.1 mM, nr1 |
GSM1564901 |
1 days, valproic acid 0.1 mM, nr2 |
GSM1564902 |
1 days, valproic acid 0.33 mM, nr1 |
GSM1564903 |
1 days, valproic acid 0.33 mM, nr2 |
GSM1564904 |
1 days, valproic acid 0.33 mM, nr3 |
GSM1564905 |
1 days, valproic acid 0.33 mM, nr4 |
GSM1564906 |
1 days, valproic acid 0.33 mM, nr5 |
GSM1564907 |
1 days, valproic acid 0.33 mM, nr6 |
GSM1564908 |
1 days, valproic acid 1 mM, nr1 |
GSM1564909 |
1 days, valproic acid 1 mM, nr2 |
GSM1564910 |
1 days, valproic acid 1 mM, nr3 |
GSM1564911 |
1 days, valproic acid 1 mM, nr4 |
GSM1564912 |
1 days, valproic acid 1 mM, nr5 |
GSM1564913 |
1 days, valproic acid 1 mM, nr6 |
GSM1564914 |
7 days, valproic acid 0.1 mM, nr1 |
GSM1564915 |
7 days, valproic acid 0.1 mM, nr2 |
GSM1564916 |
7 days, valproic acid 0.33 mM, nr1 |
GSM1564917 |
7 days, valproic acid 0.33 mM, nr2 |
GSM1564918 |
7 days, valproic acid 0.33 mM, nr3 |
GSM1564919 |
7 days, valproic acid 0.33 mM, nr4 |
GSM1564920 |
7 days, valproic acid 0.33 mM, nr5 |
GSM1564921 |
7 days, valproic acid 0.33 mM, nr6 |
GSM1564922 |
7 days, valproic acid 1 mM, nr1 |
GSM1564923 |
7 days, valproic acid 1 mM, nr2 |
GSM1564924 |
7 days, valproic acid 1 mM, nr3 |
GSM1564925 |
7 days, valproic acid 1 mM, nr4 |
GSM1564926 |
7 days, valproic acid 1 mM, nr5 |
GSM1564927 |
7 days, valproic acid 1 mM, nr6 |
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Relations |
BioProject |
PRJNA270221 |
Supplementary file |
Size |
Download |
File type/resource |
GSE64123_RAW.tar |
209.0 Mb |
(http)(custom) |
TAR (of CEL) |
Processed data included within Sample table |
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