|
| Status |
Public on Dec 17, 2014 |
| Title |
Affymetrix SNP copy number data for embryonic stem cell samples |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
SNP genotyping by SNP array
|
| Summary |
Human pluripotent stem cell (hPSC) lines exhibit repeated patterns of genetic variation, which can alter in vitro properties as well as suitability for clinical use. We examined associations between copy number variations (CNVs) on chromosome 17 and hPSC mesodiencephalic dopaminergic (mDA) differentiation.
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| |
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| Overall design |
Affymetrix SNP arrays were performed according to the manufacturer's directions on DNA extracted from cryopreserved stem cell samples.
Copy number analysis of Affymetrix Genome-Wide Human SNP Array 6.0 was performed for 17 stem cell samples.
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| |
|
| Contributor(s) |
Freed W |
| Citation(s) |
25640183 |
| |
| Submission date |
Dec 16, 2014 |
| Last update date |
Nov 27, 2018 |
| Contact name |
William Freed |
| Organization name |
NIDA NIH
|
| Street address |
333 CASSELL DRIVE
|
| City |
BALTIMORE |
| State/province |
MD |
| ZIP/Postal code |
21224 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
|
| Samples (17)
|
|
| Relations |
| BioProject |
PRJNA270524 |
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