|
| Status |
Public on Dec 22, 2014 |
| Title |
Urban waterways microbial communities (Affymetrix) |
| Platform organism |
Bacteria |
| Sample organism |
mixed sample |
| Experiment type |
Genome variation profiling by array
|
| Summary |
The increased urban pressures are often associated with specialization of microbial communities. Microbial communities being a critical player in the geochemical processes, makes it important to identify key environmental parameters that influence the community structure and its function.In this proect we study the influence of land use type and environmental parameters on the structure and function of microbial communities. The present study was conducted in an urban catchment, where the metal and pollutants levels are under allowable limits. The overall goal of this study is to understand the role of engineered physicochemical environment on the structure and function of microbial communities in urban storm-water canals. Microbial community structure was determined using PhyoChio (G3)
|
| |
|
| Overall design |
Water and sediment samples were collected after a rain event from Sungei Ulu Pandan watershed of >25km2, which has two major land use types: Residential and industrial. Samples were analyzed for physicochemical variables and microbial community structure and composition. Microbial community structure was determined using PhyoChio (G3)
|
| |
|
| Contributor(s) |
Saxena G, Marzinelli EM, Naing NN, He Z, Liang Y, Tom L, Mitra S, Ping H, Joshi UM, Reuben S, Mynampati KC, Mishra S, Umashankar S, Zhou J, Andersen G, Kjelleberg S, Swarup S |
| Citation(s) |
25564876 |
| |
| Submission date |
Dec 19, 2014 |
| Last update date |
Jan 12, 2015 |
| Contact name |
Gourvendu Saxena |
| E-mail(s) |
gssin20@gmail.com
|
| Phone |
+6596775871
|
| Organization name |
National University of Singapore
|
| Department |
The Singapore Centre on Environmental Life Sciences Engineering
|
| Street address |
#05-02, 28 Medical Drive
|
| City |
Singapore |
| State/province |
Singapore (General) |
| ZIP/Postal code |
117456 |
| Country |
Singapore |
| |
|
| Platforms (1) |
| GPL19572 |
[PhyloChip] Affymetrix G3 PhyloChip |
|
| Samples (23)
|
|
| This SubSeries is part of SuperSeries: |
| GSE64376 |
Urban waterways microbial communities |
|
| Relations |
| BioProject |
PRJNA270850 |
Less...
More...