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Status |
Public on Dec 20, 2007 |
Title |
Prostate cancer cell line with slienceing of PDEF or control (GFP) gene using siRNA. |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by array
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Summary |
PDEF(Prostate Derived Ets factor) is a member of Ets transcription factor with specific expression in Prostate. We identified target genes for PDEF in prostate cancer cell line PC-3 using Affymetrix Genechip Microarray technology. Keywords: target gene identification for transcription factor
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Overall design |
Stable cell lines were generated by infecting with Lentivirus contained silence RNA for PDEF and control GFP in PC-3 cells. 48 h after infection, total RNA was isolated from those samples.
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Contributor(s) |
Libermann TA |
Citation missing |
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Submission date |
Dec 20, 2006 |
Last update date |
Mar 28, 2013 |
Contact name |
Towia A Libermann |
E-mail(s) |
tliberma@bidmc.harvard.edu
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Organization name |
Beth Israel Deaconess Medical Center
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Department |
Medicine
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Street address |
99 Brookline Ave.
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City |
Boston |
State/province |
MA |
ZIP/Postal code |
02115 |
Country |
USA |
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Platforms (1) |
GPL4685 |
[U133AAofAv2] Affymetrix GeneChip HT-HG_U133A Early Access Array |
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Samples (4)
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GSM152018 |
PC-3 siGFP_1 (Contol cell line with slienceing of GFP) |
GSM152019 |
PC-3 siGFP_2 (Contol cell line with slienceing of GFP) |
GSM152020 |
PC-3 siPDEF_1 (Experimental cell line with slienceing of PDEF) |
GSM152021 |
PC-3 siPDEF_2 (Experimental cell line with slienceing of PDEF) |
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Relations |
BioProject |
PRJNA98757 |