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Series GSE6576 Query DataSets for GSE6576
Status Public on Dec 20, 2007
Title Prostate cancer cell line with slienceing of PDEF or control (GFP) gene using siRNA.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary PDEF(Prostate Derived Ets factor) is a member of Ets transcription factor with specific expression in Prostate. We identified target genes for PDEF in prostate cancer cell line PC-3 using Affymetrix Genechip Microarray technology.
Keywords: target gene identification for transcription factor
 
Overall design Stable cell lines were generated by infecting with Lentivirus contained silence RNA for PDEF and control GFP in PC-3 cells. 48 h after infection, total RNA was isolated from those samples.
 
Contributor(s) Libermann TA
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Submission date Dec 20, 2006
Last update date Mar 28, 2013
Contact name Towia A Libermann
E-mail(s) tliberma@bidmc.harvard.edu
Organization name Beth Israel Deaconess Medical Center
Department Medicine
Street address 99 Brookline Ave.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL4685 [U133AAofAv2] Affymetrix GeneChip HT-HG_U133A Early Access Array
Samples (4)
GSM152018 PC-3 siGFP_1 (Contol cell line with slienceing of GFP)
GSM152019 PC-3 siGFP_2 (Contol cell line with slienceing of GFP)
GSM152020 PC-3 siPDEF_1 (Experimental cell line with slienceing of PDEF)
Relations
BioProject PRJNA98757

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6576_RAW.tar 17.5 Mb (http)(custom) TAR (of CEL)

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