GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE65788 Query DataSets for GSE65788
Status Public on Oct 01, 2015
Title Small RNA profiling during anther development in 7B-1 male-sterile tomato mutant and its wild type
Organism Solanum lycopersicum
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The RNA-seq was used to identify differentially regulated miRNAs between a male sterile and wild type tomato during anther development.
Overall design Two small RNA libraries were constructed from male-sterile and wild type tomato flower buds using the TruSeq Small RNA Sample Preparation Kit from Illumina, and were sequenced on the Illumina Hiseq2000
Contributor(s) Omidvar V, Mohorianu I, Dalmay T, Fellner M
Citation(s) 26511108
Submission date Feb 10, 2015
Last update date May 15, 2019
Contact name Irina Mohorianu
Organization name University of Oxford
Department Medical Sciences Division
Lab Oxford Vaccine Group
Street address Headington
City Oxford
ZIP/Postal code OX3 7LE
Country United Kingdom
Platforms (1)
GPL16345 Illumina HiSeq 2000 (Solanum lycopersicum)
Samples (2)
GSM1606376 Wild type
GSM1606377 Mutant
BioProject PRJNA275054
SRA SRP053415

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65788_RAW.tar 27.1 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap