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Series GSE66288 Query DataSets for GSE66288
Status Public on Feb 26, 2015
Title ChIP-chip analysis of CspC binding in Salmonella enterica serovar Typhimurium strain SL1344
Organism Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Experiment type Genome binding/occupancy profiling by array
Summary We performed Chromatin Immunoprecipitation (ChIP) and microarray hybridization analysis of CspC binding in Salmonella Typhimurium strain SL1344 which has been genetically engineered to express a 3xFLAG tagged CspC protein.
Overall design Chromatin samples were prepared from SL1344 CspC 3xFLAG grown to exponential phase (OD600nm = 0.2). CspC FLAG ChIP and mock normal mouse IgG ChIP reactions were carried out. The purified ChIP DNA samples were hybridized to SL1344 tiling microarrays.
Contributor(s) Dorman MJ, Dorman CJ, Dillon SC
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Submission date Feb 25, 2015
Last update date Feb 27, 2015
Contact name Shane Dillon
Organization name Moyne Institute of Preventive Medicine
Department Department of Microbiology
Street address Trinity College
City Dublin
ZIP/Postal code Dublin 2
Country Ireland
Platforms (1)
GPL10008 Oxford Gene Technology Chip2 Salmonella typhimurium microarray SL1344 strain product code: 010021
Samples (2)
GSM1618739 SL1344_CspC_ChIP_chip
GSM1618740 SL1344_mouse_IgG_ChIP_chip
BioProject PRJNA276443

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Supplementary file Size Download File type/resource
GSE66288_RAW.tar 9.5 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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