NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE6694 Query DataSets for GSE6694
Status Public on Dec 01, 2008
Title Zebrafish Paired End DiTag libraries
Organism Danio rerio
Experiment type Other
Summary Used a DNA tag sequencing and mapping strategy called gene identification signature (GIS) analysis, in which 5' and 3' signatures of full-length cDNAs are accurately extracted into paired-end ditags (PETs) that are concatenated for efficient sequencing and mapped to genome sequences to demarcate the transcription boundaries of every gene. GIS analysis is potentially 30-fold more efficient than standard cDNA sequencing approaches for transcriptome characterization.
Keywords: Paired End DiTags
 
Overall design 5 zebrafish tissues examined.
 
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 09, 2007
Last update date Mar 16, 2012
Contact name Chia Lin Wei
Organization name Genome Institute Of Singapore
Street address 60 Biopolis Street, #02-01, Genome
City Singapore
ZIP/Postal code 138672
Country Singapore
 
Platforms (1)
GPL4737 Zebrafish Paired End DiTags
Samples (5)
GSM154487 PET counts from adult gut/internal organs
GSM154488 PET counts from embryos
GSM154489 PET counts from adult brain
Relations
BioProject PRJNA99051

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap