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Series GSE68061 Query DataSets for GSE68061
Status Public on Apr 21, 2015
Title Human CD14+CD16- and CD16+ monocyte-derived macrophages primed by GM-CSF or M-CSF
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Identification of genes differentially expressed between human CD14+CD16- and CD16+ monocyte-derived macrophages generated in the presence of either GM-CSF (termed GM14 and GM16, respectively) or M-CSF (termed M14 and M16, respectively)
 
Overall design Human peripheral CD14+CD16- and CD16+ blood monocytes from three independent healthy donors (D1, D2 and D3) were isolated by positive selection from peripheral blood mononuclear cells (PBMC) using magnetic separation systems (MACS, Miltenyi Biotec). Briefly, PBMC were first incubated with MACS anti-CD56 antibody conjugated to paramagnetic microbeads in order to eliminate the NK (CD16+) cell fraction. NK-depleted PBMC were further incubated with MACS anti-CD16 antibody to isolate CD16+ monocytes. CD56-CD16- PBMC were finally incubated with MACS anti-CD14 antibody to obtain the CD14+CD16- monocyte fraction. Monocytes were cultured for 7 days in medium containing either GM-CSF or M-CSF. Total RNA from each condition was extracted using the RNeasy kit (Qiagen) and hybridized to an Agilent Human Whole Genome (4x44) Oligo Microarray. All experimental procedures were performed following manufacturer instructions.
 
Contributor(s) Sanchez-Torres C, Corbi AL
Citation(s) 26729812, 36930354
Submission date Apr 20, 2015
Last update date Jul 14, 2023
Contact name Carmen Sánchez-Torres
E-mail(s) csanchez@cinvestav.mx
Organization name CINVESTAV-IPN
Department Molecular Biomedicine
Street address I.P.N. Av. 2508
City Mexico City
State/province D.F.
ZIP/Postal code 07360
Country Mexico
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (12)
GSM1662128 GM16 Macrophage replicate 1
GSM1662129 M16 Macrophage replicate 1
GSM1662130 GM14 Macrophage replicate 1
Relations
BioProject PRJNA281641

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68061_Raw_Intensity_Data_All_Probes.txt.gz 2.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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