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Series GSE70600 Query DataSets for GSE70600
Status Public on May 16, 2016
Title Gene expression changes in the retina following human neural progenitor cell injection into a rodent model for retinal degeneration
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study is to compare gene expression changes in retinal degenerate Royal College of Surgeons (RCS) rats following an injection of human neural progenitor cells (hNPCs) using RNA-seq, as compared to RCS rats receiving a sham surgery and wild-type Long Evans rats. These changes may lead to understanding of the therapeutic potential of hNPCs in inducing photoreceptor survival and visual function preservation.
 
Overall design RNA-seq from wild-type Long Evans rats, retinal degenerate Royal College of Surgeons (RCS) rats, and RCS rats following transplantation of human neural progenitor cells (hNPCs)
 
Contributor(s) Jones MK, Saghizadeh M, Lu B, Svendsen CN, Wang S
Citation(s) 27217715
Submission date Jul 07, 2015
Last update date May 15, 2019
Contact name Melissa Kaye Jones
Organization name Cedars-Sinai Medical Center
Department Biomedical Sciences
Lab Shaomei Wang
Street address 8700 Beverly Blvd.
City Los Angeles
State/province CA
ZIP/Postal code 90048
Country USA
 
Platforms (1)
GPL20670 Ion Torrent PGM (Rattus norvegicus)
Samples (6)
GSM1811403 LEsham replicate 1 (L1S)
GSM1811404 LEsham replicate 2 (L2S)
GSM1811405 RCSsham replicate 1 (R2S)
Relations
BioProject PRJNA289237
SRA SRP060514

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70600_RAW.tar 11.9 Mb (http)(custom) TAR (of XLS)
GSE70600_RatRetinalRNA-seqFPKMs.txt.gz 789.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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