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Series GSE72629 Query DataSets for GSE72629
Status Public on Nov 26, 2015
Title Acute loss of TET function results in aggressive myeloid cancer in mice [WGBS]
Organism Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Summary To evaluate the DNA methylation in LSK cells from the bone marrow of wildtype or Tet2/3 DKO mice.
Overall design In order to address the impact of the loss of Tet2/3 proteins in DNA methylation in LSK cells, we compared by WGBS the methylome of wild and, Tet2/3 DKO LSK cells in bone marrow.
Contributor(s) An J, Gonzalez Avalos E, Chavez L, Ko M, Rao A
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Submission date Sep 02, 2015
Last update date May 15, 2019
Contact name Anjana Rao
Phone 8587526500
Organization name La Jolla institute
Department Signaling and Gene Epression
Street address 9420 Athena Circle
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (6)
GSM1866966 WGBS seq WT LSK BR1
GSM1866967 WGBS seq WT LSK BR2
GSM1866968 WGBS seq WT LSK BR3
This SubSeries is part of SuperSeries:
GSE72630 Acute loss of TET function results in aggressive myeloid cancer in mice
BioProject PRJNA294516
SRA SRP063093

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Supplementary file Size Download File type/resource 233.8 Mb (ftp)(http) TAB
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