|
| Status |
Public on Nov 26, 2015 |
| Title |
Acute loss of TET function results in aggressive myeloid cancer in mice [WGBS] |
| Organism |
Mus musculus |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
To evaluate the DNA methylation in LSK cells from the bone marrow of wildtype or Tet2/3 DKO mice.
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| |
|
| Overall design |
In order to address the impact of the loss of Tet2/3 proteins in DNA methylation in LSK cells, we compared by WGBS the methylome of wild and, Tet2/3 DKO LSK cells in bone marrow.
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| |
|
| Contributor(s) |
An J, Gonzalez Avalos E, Chavez L, Ko M, Rao A |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Sep 02, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Anjana Rao |
| E-mail(s) |
arao@lji.org
|
| Phone |
8587526500
|
| Organization name |
La Jolla institute
|
| Department |
Signaling and Gene Epression
|
| Street address |
9420 Athena Circle
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92037 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
|
| Samples (6)
|
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| This SubSeries is part of SuperSeries: |
| GSE72630 |
Acute loss of TET function results in aggressive myeloid cancer in mice |
|
| Relations |
| BioProject |
PRJNA294516 |
| SRA |
SRP063093 |
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