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Series GSE73455 Query DataSets for GSE73455
Status Public on Sep 25, 2017
Title Transcriptome analysis of calcium-regulated genes in relation to broccoli hypocotyl cell expansion
Organism Brassica oleracea
Experiment type Expression profiling by high throughput sequencing
Summary We report the application of RNA-seq to uncover the underlying mechanism of 10 mM calcium chloride spray on broccoli seedlings (Brassica oleracea var. italic) boosted the hypocotyl elongation and delayed the senescence.
 
Overall design Examination of Ca2+ and water spray broccoli microgreens
 
Contributor(s) Yang T, Shangguan L
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 25, 2015
Last update date May 15, 2019
Contact name Tianbao Yang
E-mail(s) tianbao.yang@ars.usda.gov
Phone 301-504-6635
Organization name USDA-ARS
Department BARC
Lab Fruit Quality Lab
Street address 10300 BALTIMORE AVENUE
City beltsville
State/province MD
ZIP/Postal code 20705
Country USA
 
Platforms (1)
GPL16360 Illumina HiSeq 2000 (Brassica oleracea)
Samples (4)
GSM1894166 Water_1
GSM1894167 Water_2
GSM1894168 Ca_1
Relations
BioProject PRJNA297049
SRA SRP064205

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE73455_RPKM.xlsx 35.6 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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