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Series GSE73616 Query DataSets for GSE73616
Status Public on Oct 28, 2016
Title An interaction with Ewing's sarcoma breakpoint protein EWS defines the subset of ETS factors rearranged in prostate cancer
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ERG activates prostate cancer specific gene expression program by recruiting RNA binding protein EWS to ETS-AP1 and GGAA microsatellite enhancers
Overall design ChIP-Seq of transcription factor ERG and its co-activator EWS
Contributor(s) Kedage V, Selvaraj N, Budka JA, Jerde TJ, Hollenhorst PC
Citation(s) 27783944
Submission date Sep 30, 2015
Last update date May 15, 2019
Contact name Vivekananda Kedage
Organization name Indiana University
Street address 1001 E. third Street
City Bloomington
State/province IN
ZIP/Postal code 47405
Country USA
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (10)
GSM1899558 ERG ChIP-Seq
GSM1899559 VCaP input 1
GSM1899560 VCaP input 2
BioProject PRJNA297431
SRA SRP064349

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE73616_RAW.tar 290.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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