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Series GSE74863 Query DataSets for GSE74863
Status Public on Jan 09, 2018
Title Expression data and HIRA ChIP-seq data from interferon treated IMR90 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary IMR90 cells treated with IFN and without IFN, with and without a lentivirus knockdown of HIRA
 
Overall design We used RNA-Seq and ChIP-seq to detail the global programme of gene expression and HIRA binding in cells treated with and without IFN
 
Contributor(s) Rai TS, Glass M, Cole JJ, Adams PD
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 10, 2015
Last update date May 15, 2019
Contact name Peter Adams
Organization name University of Glasgow, Beatson Institute for Cancer Research
Street address Switchback Rd, Bearsden
City Glasgow
ZIP/Postal code G61 1BD
Country United Kingdom
 
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (22)
GSM1936737 shHIRA_1_IFN_0hrs_Replicate1
GSM1936738 shHIRA_1_IFN_0hrs_Replicate2
GSM1936739 shHIRA_1_IFN_6hrs_Replicate1
Relations
BioProject PRJNA301692
SRA SRP066000

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74863_RAW.tar 5.3 Gb (http)(custom) TAR (of BIGWIG, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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