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Series GSE75848 Query DataSets for GSE75848
Status Public on Jan 01, 2016
Title The chicken immature erythrocyte transcriptome
Organism Gallus gallus
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptional regulation is impacted by multiple layers of genome organization. Here, we identified and mapped out all the transcriptionally active chromosomal domains in the chicken immature erythrocyte genome, including the known β- and α-globin domains, by combining a powerful chromatin fractionation method with next generation DNA and RNA sequencing.
 
Overall design Two biological replicates of total RNA were sequenced to characterize genes in chicken erythrocyte cells
 
Contributor(s) Jahan S, xu W, He S, Gonzalez C, Delcuve GP, Davie JR
Citation(s) 27226810
Submission date Dec 09, 2015
Last update date Jan 16, 2023
Contact name James Ronald Davie
E-mail(s) jim.davie@umanitoba.ca
Phone 2042723174
Organization name University of Manitoba
Department Biochemistry and Medical Genetics
Street address 745 Bannatyne Avenue, RM 333A
City Winnipeg
State/province Manitoba
ZIP/Postal code R3E 0J9
Country Canada
 
Platforms (1)
GPL21224 AB 5500xl Genetic Analyzer (Gallus gallus)
Samples (4)
GSM1968821 Total RNAseq of cell sample s1
GSM1968822 Total RNAseq of cell sample s2
GSM1968823 Nuclear RNAseq of cell sample s1
This SubSeries is part of SuperSeries:
GSE75955 The chicken erythrocyte epigenome
Relations
BioProject PRJNA305527
SRA SRP067179

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75848_RAW.tar 560.0 Kb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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