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Series GSE76648 Query DataSets for GSE76648
Status Public on Aug 17, 2016
Title Global Genome Repair factors are essential for shaping the DNA methylation landscape in Arabidopsis [BS-seq]
Organism Arabidopsis thaliana
Experiment type Methylation profiling by high throughput sequencing
Summary We report the methylome analysis of Arabidopsis plants deficient for the expression of 2 factors involved in global genome repair using whole genome bisulfite sequencing technology
 
Overall design Methylomes of global genome repair deficient Arabidopsis plants
 
Contributor(s) Molinier J, Colot V
Citation(s) 27531226
Submission date Jan 07, 2016
Last update date May 15, 2019
Contact name Jean Molinier
E-mail(s) Jean.Molinier@ibmp-cnrs.unistra.fr
Phone +33 (0) 3 67 15 53 12
Organization name IBMP-CNRS
Street address 12 rue du General Zimmer
City Strasbourg
ZIP/Postal code 67084
Country France
 
Platforms (1)
GPL9062 Illumina Genome Analyzer (Arabidopsis thaliana)
Samples (2)
GSM2031992 Col
GSM2031993 ddb2-3
This SubSeries is part of SuperSeries:
GSE76651 Global Genome Repair factors are essential for shaping the DNA methylation landscape in Arabidopsis
Relations
BioProject PRJNA308231
SRA SRP068211

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE76648_Col_DsLox_CG_all.differenceDMRs.gff.gz 330.5 Kb (ftp)(http) GFF
GSE76648_Col_DsLox_CHG_all.differenceDMRs.gff.gz 50.4 Kb (ftp)(http) GFF
GSE76648_Col_DsLox_CHH_all.differenceDMRs.gff.gz 50.8 Kb (ftp)(http) GFF
GSE76648_Col_cen_CG_all.differenceDMRs.gff.gz 352.5 Kb (ftp)(http) GFF
GSE76648_Col_cen_CHG_all.differenceDMRs.gff.gz 74.6 Kb (ftp)(http) GFF
GSE76648_Col_cen_CHH_all.differenceDMRs.gff.gz 55.2 Kb (ftp)(http) GFF
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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