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Series GSE80792 Query DataSets for GSE80792
Status Public on Feb 15, 2018
Title CpG island mediated linear and spatial gene partitioning (MOE430V2)
Sample organism Mus musculus
Experiment type Expression profiling by array
Third-party reanalysis
Summary In order to study the gene expression change upon transcription factor (MYOD1, SPI1) induction, we reanalyzed published gene expression microarray data. Raw data were preprocessed and normalized with the Robust Multi-array Average (RMA)(Irizarry et al., 2003) method.
Overall design Microarray gene expression profile upon MYOD1 induction in mouse embryonic fibroblast cells and SPI1 recovery in myeloid progenitors.
Contributor(s) Kim J, Beck S
Citation(s) 29529258
Submission date Apr 28, 2016
Last update date May 17, 2018
Contact name Jonghwan Kim
Phone 512-232-8046
Organization name University of Texas at Austin
Department Department of Molecular Cell and Developmental Biology, Institute for Cellular and Molecular Biology
Lab Kim Lab
Street address 2506 Speedway NMS 4.246
City Austin
State/province TX
ZIP/Postal code 78712
Country USA
This SubSeries is part of SuperSeries:
GSE80799 Implications of CpG islands on chromosomal architectures and modes of global gene regulation
Reanalysis of GSM328688
Reanalysis of GSM328689
Reanalysis of GSM328690
Reanalysis of GSM328691
Reanalysis of GSM328692
Reanalysis of GSM328693
Reanalysis of GSM857400
Reanalysis of GSM857401
Reanalysis of GSM857402
Reanalysis of GSM857406
Reanalysis of GSM857407
Reanalysis of GSM857408
Reanalysis of GSM266115
Reanalysis of GSM265044
BioProject PRJNA319989

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80792_reanalysis_data.RMA.txt.gz 4.9 Mb (ftp)(http) TXT
Processed data are available on Series record

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