|
| Status |
Public on Feb 15, 2018 |
| Title |
CpG island mediated linear and spatial gene partitioning (MOE430V2) |
| Sample organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Third-party reanalysis
|
| Summary |
In order to study the gene expression change upon transcription factor (MYOD1, SPI1) induction, we reanalyzed published gene expression microarray data. Raw data were preprocessed and normalized with the Robust Multi-array Average (RMA)(Irizarry et al., 2003) method.
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| |
|
| Overall design |
Microarray gene expression profile upon MYOD1 induction in mouse embryonic fibroblast cells and SPI1 recovery in myeloid progenitors.
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| |
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| Contributor(s) |
Kim J, Beck S |
| Citation(s) |
29529258 |
| |
| Submission date |
Apr 28, 2016 |
| Last update date |
May 17, 2018 |
| Contact name |
Jonghwan Kim |
| E-mail(s) |
jybella@utexas.edu
|
| Phone |
512-232-8046
|
| Organization name |
University of Texas at Austin
|
| Department |
Department of Molecular Cell and Developmental Biology, Institute for Cellular and Molecular Biology
|
| Lab |
Kim Lab
|
| Street address |
2506 Speedway NMS 4.246
|
| City |
Austin |
| State/province |
TX |
| ZIP/Postal code |
78712 |
| Country |
USA |
| |
|
| This SubSeries is part of SuperSeries: |
| GSE80799 |
Implications of CpG islands on chromosomal architectures and modes of global gene regulation |
|
| Relations |
| Reanalysis of |
GSM328688 |
| Reanalysis of |
GSM328689 |
| Reanalysis of |
GSM328690 |
| Reanalysis of |
GSM328691 |
| Reanalysis of |
GSM328692 |
| Reanalysis of |
GSM328693 |
| Reanalysis of |
GSM857400 |
| Reanalysis of |
GSM857401 |
| Reanalysis of |
GSM857402 |
| Reanalysis of |
GSM857406 |
| Reanalysis of |
GSM857407 |
| Reanalysis of |
GSM857408 |
| Reanalysis of |
GSM266115 |
| Reanalysis of |
GSM265044 |
| BioProject |
PRJNA319989 |
