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Series GSE81493 Query DataSets for GSE81493
Status Public on Oct 28, 2016
Title An interaction with Ewing's sarcoma breakpoint protein EWS defines the specific oncogenic mechanism of ETS factors rearranged in prostate cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary ERG activates prostate cancer specific gene expression program by recuriting RNA binding protein EWS
Overall design RNA-seq of polyA selected RNA from RWPE1 cells expressing either empty vector, ERG-WT, ERG-WT with EWS shRNA, and ERG-P436A
Contributor(s) Kedage V, Hollenhorst PC
Citation(s) 27783944
Submission date May 16, 2016
Last update date May 15, 2019
Contact name Vivekananda Kedage
Organization name Indiana University
Street address 1001 E. third Street
City Bloomington
State/province IN
ZIP/Postal code 47405
Country USA
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (12)
GSM2154810 RWPE1 empty vector replicate 1
GSM2154811 RWPE1 empty vector replicate 2
GSM2154812 RWPE1 empty vector replicate 3
BioProject PRJNA321758
SRA SRP075246

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Supplementary file Size Download File type/resource
GSE81493_Differential_gene_expression_analysis.diff.gz 4.2 Mb (ftp)(http) DIFF
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Raw data are available in SRA
Processed data are available on Series record

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