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Series GSE82131 Query DataSets for GSE82131
Status Public on Aug 10, 2016
Title HiSeq Chip-seq analysis of whole genomic landscape of G9a and H3K9me2-targeted in CCICs
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Purpose: to demonstrate that G9a maintain CCICs functional triats is independent of its methyltransferase activity.
Method: ChIP-seq was applied to CCICs to elucidate the nature of G9a and H3K9me2-regulated differential gene targets by Illumina/Soleza Genome analyzer
Results: It was shown that ghe 4,902 G9a-and H3K9me2-targeted genes are broadly idstributed throughout the genome, and both are co-localized at most of the sites in CCICs.
Overall design G9a and H3K9me2-targeted in CCICs
Contributor(s) Cha S
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Submission date Jun 01, 2016
Last update date May 15, 2019
Contact name SHIH-TING CHA
Organization name National Taiwan University
Street address 6F., No.2, Syu-jhou Road,
ZIP/Postal code 886
Country Taiwan
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (4)
GSM2183948 1.CCIC-G9a
GSM2183949 2.CCIC-H3K9me2
GSM2183950 3.CCIC-shG9a-DNG9a
BioProject PRJNA324111
SRA SRP075976

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE82131_RAW.tar 948.3 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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