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Series GSE82351 Query DataSets for GSE82351
Status Public on Jun 22, 2016
Title WGBS from stomach (ENCSR013VIR)
Project Mouse ENCODE
Organism Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Summary Whole genome bisulfite-seq on embryonic 15.5 day mouse stomach

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR013VIR/
 
Citation(s) 22955616
BioProject PRJNA63471
Submission date Jun 07, 2016
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM2190936 WGBS from stomach (ENCLB568ODR)
GSM2190937 WGBS from stomach (ENCLB396CPQ)
GSM2190938 WGBS from stomach (ENCLB491WCK)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE82351_ENCFF060HUE_methylation_state_at_CHH_mm10.bigBed 9.7 Gb (ftp)(http) BIGBED
GSE82351_ENCFF083JVV_methylation_state_at_CpG_mm10.bigBed 938.2 Mb (ftp)(http) BIGBED
GSE82351_ENCFF176GYO_methylation_state_at_CHH_mm10.bed.gz 7.3 Gb (ftp)(http) BED
GSE82351_ENCFF284YYM_methylation_state_at_CHH_mm10.bed.gz 7.3 Gb (ftp)(http) BED
GSE82351_ENCFF301QSZ_methylation_state_at_CpG_mm10.bed.gz 483.0 Mb (ftp)(http) BED
GSE82351_ENCFF398FWR_signal_mm10.bigWig 4.6 Gb (ftp)(http) BIGWIG
GSE82351_ENCFF414AQD_methylation_state_at_CHH_mm10.bigBed 9.6 Gb (ftp)(http) BIGBED
GSE82351_ENCFF455WPB_methylation_state_at_CHG_mm10.bed.gz 2.3 Gb (ftp)(http) BED
GSE82351_ENCFF507FGN_signal_mm10.bigWig 4.6 Gb (ftp)(http) BIGWIG
GSE82351_ENCFF744YBD_methylation_state_at_CHG_mm10.bigBed 3.9 Gb (ftp)(http) BIGBED
GSE82351_ENCFF748HYK_methylation_state_at_CHG_mm10.bed.gz 2.3 Gb (ftp)(http) BED
GSE82351_ENCFF766NPQ_methylation_state_at_CpG_mm10.bigBed 936.9 Mb (ftp)(http) BIGBED
GSE82351_ENCFF862USH_methylation_state_at_CHG_mm10.bigBed 3.9 Gb (ftp)(http) BIGBED
GSE82351_ENCFF880SXA_methylation_state_at_CpG_mm10.bed.gz 484.3 Mb (ftp)(http) BED
GSE82351_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data not provided for this record

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